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Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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L
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M
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N
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O
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P
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R
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S
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T
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U
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V
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X
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Y
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Z
A
addCommand() (UndoCommand method)
addFace() (Solid method)
addVectors() (in module cadnano.extras.math.vector)
addVertex() (Solid method)
ALL (ViewReceiveEnum attribute)
(ViewSendEnum attribute)
app() (in module cadnano)
appendUndoStack() (UndoStack method)
applyMatrix() (Solid method)
applyMatrix3() (in module cadnano.extras.math.vector)
applyMatrix4() (in module cadnano.extras.math.vector)
ARBITRARY (PointEnum attribute)
AxisEnum (class in cadnano.proxies.cnenum)
B
BaseObject (in module cadnano.proxies.cnproxy)
beginMacro() (UndoStack method)
BitEnum (class in cadnano.proxies.cnenum)
BOTH (OrthoViewEnum attribute)
BOTTOM (HandleEnum attribute)
BOTTOM_LEFT (HandleEnum attribute)
BOTTOM_RIGHT (HandleEnum attribute)
Box (class in cadnano.extras.math.box)
C
cadnano (module)
cadnano.color (module)
cadnano.decorators (module)
cadnano.decorators.insertion (module)
cadnano.extras (module)
cadnano.extras.dnasequences (module)
cadnano.extras.fasta (module)
cadnano.extras.genbank (module)
cadnano.extras.math (module)
cadnano.extras.math.box (module)
cadnano.extras.math.face (module)
cadnano.extras.math.matrix3 (module)
cadnano.extras.math.matrix4 (module)
cadnano.extras.math.solid (module)
cadnano.extras.math.vector (module)
cadnano.extras.sequencemods (module)
cadnano.extras.wrapapi (module)
cadnano.fileio (module)
cadnano.gui (module)
cadnano.gui.dialogs (module)
cadnano.gui.mainwindow (module)
cadnano.proxies (module)
cadnano.proxies.cnenum (module)
cadnano.proxies.cnobject (module)
cadnano.proxies.cnproxy (module)
cadnano.proxies.proxyconfigure (module)
cadnano.setpropertycmd (module)
cadnano.undocommand (module)
cadnano.undostack (module)
cadnano.views (module)
cadnano.views.outlinerview (module)
cadnano.views.outlinerview.outlinerstyles (module)
cadnano.views.propertyview (module)
canRedo() (UndoStack method)
canUndo() (UndoStack method)
center() (Box method)
clone() (Box method)
CNObject (class in cadnano.proxies.cnobject)
Color (class in cadnano.color)
computeFaceNormals() (Solid method)
connect() (DummySignal method)
(ProxyObject method)
containsBox() (Box method)
containsPoint() (Box method)
copyWrapAPI() (in module cadnano.extras.wrapapi)
crossProduct() (in module cadnano.extras.math.vector)
D
deleteLater() (ProxyObject method)
disconnect() (DummySignal method)
(ProxyObject method)
documentWasCreatedSignal (TempApp attribute)
doesBoxSpan() (Box method)
DummySignal (class in cadnano.proxies.cnproxy)
E
emit() (DummySignal method)
END_3PRIME (ModEnum attribute)
END_5PRIME (ModEnum attribute)
endMacro() (UndoStack method)
EnumMask (class in cadnano.proxies.cnenum)
enumNames() (in module cadnano.proxies.cnenum)
F
Face (class in cadnano.extras.math.face)
G
getBatch() (in module cadnano)
getInverse() (in module cadnano.extras.math.matrix3)
getNormalMatrix() (in module cadnano.extras.math.matrix3)
getPublicMethods() (in module cadnano.extras.wrapapi)
getReopen() (in module cadnano)
GRID (OrthoViewEnum attribute)
(ViewReceiveEnum attribute)
(ViewSendEnum attribute)
GridEnum (class in cadnano.proxies.cnenum)
H
HandleEnum (class in cadnano.proxies.cnenum)
hex() (Color method)
HONEYCOMB (GridEnum attribute)
(LatticeEnum attribute)
I
idx() (Insertion method)
initAppWithGui() (in module cadnano)
Insertion (class in cadnano.decorators.insertion)
INTERNAL (ModEnum attribute)
intToColorHex() (in module cadnano.color)
is_temp_app (TempApp attribute)
isSkip() (Insertion method)
ItemEnum (class in cadnano.proxies.cnenum)
L
LatticeEnum (class in cadnano.proxies.cnenum)
LEFT (HandleEnum attribute)
length() (Insertion method)
M
makeRotationZ() (in module cadnano.extras.math.matrix4)
makeTranslation() (in module cadnano.extras.math.matrix4)
Matrix3 (class in cadnano.extras.math.matrix3)
Matrix4 (class in cadnano.extras.math.matrix4)
ModEnum (class in cadnano.proxies.cnenum)
multiplyScalar() (in module cadnano.extras.math.vector)
N
n11 (Matrix3 attribute)
(Matrix4 attribute)
n12 (Matrix3 attribute)
(Matrix4 attribute)
n13 (Matrix3 attribute)
(Matrix4 attribute)
n14 (Matrix4 attribute)
n21 (Matrix3 attribute)
(Matrix4 attribute)
n22 (Matrix3 attribute)
(Matrix4 attribute)
n23 (Matrix3 attribute)
(Matrix4 attribute)
n24 (Matrix4 attribute)
n31 (Matrix3 attribute)
(Matrix4 attribute)
n32 (Matrix3 attribute)
(Matrix4 attribute)
n33 (Matrix3 attribute)
(Matrix4 attribute)
n34 (Matrix4 attribute)
n41 (Matrix4 attribute)
n42 (Matrix4 attribute)
n43 (Matrix4 attribute)
n44 (Matrix4 attribute)
name() (Color method)
NONE (GridEnum attribute)
normal (Face attribute)
normalizeV2() (in module cadnano.extras.math.vector)
normalizeV3() (in module cadnano.extras.math.vector)
normalToPlane() (in module cadnano.extras.math.vector)
NUCLEICACID (ItemEnum attribute)
NUCLEICACIDPART (PartEnum attribute)
O
OLIGO (ItemEnum attribute)
OrthoViewEnum (class in cadnano.proxies.cnenum)
OUTLINER (ViewReceiveEnum attribute)
(ViewSendEnum attribute)
P
parent() (ProxyObject method)
PartEnum (class in cadnano.proxies.cnenum)
PATH (ViewReceiveEnum attribute)
(ViewSendEnum attribute)
PLASMIDPART (PartEnum attribute)
PointEnum (class in cadnano.proxies.cnenum)
PROPERTY (ViewReceiveEnum attribute)
(ViewSendEnum attribute)
proxyConfigure() (in module cadnano.proxies.proxyconfigure)
ProxyObject (class in cadnano.proxies.cnproxy)
ProxySignal (in module cadnano.proxies.cnproxy)
push() (UndoStack method)
R
redo() (SetPropertyCommand method)
(SetVHPropertyCommand method)
(UndoCommand method)
(UndoStack method)
RIGHT (HandleEnum attribute)
S
SCAFFOLD (StrandEnum attribute)
set() (Box method)
setAlpha() (Color method)
setBatch() (in module cadnano)
setLength() (Insertion method)
setParent() (ProxyObject method)
SetPropertyCommand (class in cadnano.setpropertycmd)
setReopen() (in module cadnano)
setRgb() (Color method)
setUndoLimit() (UndoStack method)
SetVHPropertyCommand (class in cadnano.setpropertycmd)
signals() (ProxyObject method)
size() (Box method)
SLICE (OrthoViewEnum attribute)
(ViewReceiveEnum attribute)
(ViewSendEnum attribute)
Solid (class in cadnano.extras.math.solid)
SQUARE (GridEnum attribute)
(LatticeEnum attribute)
STAPLE (StrandEnum attribute)
StrandEnum (class in cadnano.proxies.cnenum)
subVectors() (in module cadnano.extras.math.vector)
T
TempApp (class in cadnano.proxies.cnproxy)
TOP (HandleEnum attribute)
TOP_LEFT (HandleEnum attribute)
TOP_RIGHT (HandleEnum attribute)
transpose() (in module cadnano.extras.math.matrix3)
U
undo() (SetPropertyCommand method)
(SetVHPropertyCommand method)
(UndoCommand method)
(UndoStack method)
UndoCommand (class in cadnano.undocommand)
UndoStack (class in cadnano.undostack)
undoStack() (CNObject method)
updateIdx() (Insertion method)
V
v1 (Face attribute)
v2 (Face attribute)
v2AngleBetween() (in module cadnano.extras.math.vector)
v2DistanceAndAngle() (in module cadnano.extras.math.vector)
v2dot() (in module cadnano.extras.math.vector)
v3 (Face attribute)
v3SetX() (in module cadnano.extras.math.vector)
v3SetY() (in module cadnano.extras.math.vector)
v3SetZ() (in module cadnano.extras.math.vector)
Vector2 (class in cadnano.extras.math.vector)
Vector3 (class in cadnano.extras.math.vector)
ViewReceiveEnum (class in cadnano.proxies.cnenum)
ViewSendEnum (class in cadnano.proxies.cnenum)
VIRTUALHELIX (ItemEnum attribute)
X
X (AxisEnum attribute)
x (Vector2 attribute)
(Vector3 attribute)
Y
Y (AxisEnum attribute)
y (Vector2 attribute)
(Vector3 attribute)
Z
Z (AxisEnum attribute)
z (Vector3 attribute)
Z_ONLY (PointEnum attribute)
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